DeepDive documentation
======================


.. image:: ../_static/img/overview.png
  :width: 800


.. toctree::
   :maxdepth: 1
   :caption: Getting started

   installation


.. toctree::
   :maxdepth: 1
   :caption: Tutorials

   tutorials/Training
   tutorials/Effect_size_estimation
   tutorials/Counterfactual
   tutorials/Eval_latent
   tutorials/Modelling_scRNAseq



Citation
__________
If you find DeepDive usefull, please consider citing our manuscript on `bioRxiv <https://doi.org/10.1101/2025.09.30.679466>`__.